Details for gene set BIOCARTA_THE CO-STIMULATORY SIGNAL DURING T-CELL ACTIVATION[GSEA]

Table: GSEA Results Summary

Dataset	Set_02_BT_ATM_minus_versus_ATM_plus.phenotype_BT_ATM_minus_versus_ATM_plus.cls #BT_ATM_minus_versus_ATM_plus.phenotype_BT_ATM_minus_versus_ATM_plus.cls #BT_ATM_minus_versus_ATM_plus_repos
Phenotype	phenotype_BT_ATM_minus_versus_ATM_plus.cls#BT_ATM_minus_versus_ATM_plus_repos
Upregulated in class	BT_ATM_minus
GeneSet	BIOCARTA_THE CO-STIMULATORY SIGNAL DURING T-CELL ACTIVATION
Enrichment Score (ES)	0.52401614
Normalized Enrichment Score (NES)	1.4710236
Nominal p-value	0.06113537
FDR q-value	0.65859985
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	LCK	1425396_a_at 1439145_at 1439146_s_at 1457917_at	50	2.528	0.2473	Yes
2	CTLA4	1419334_at	529	1.413	0.3650	Yes
3	PIK3CA	1423144_at 1429434_at 1429435_x_at 1440054_at 1453134_at 1460326_at	854	1.165	0.4652	Yes
4	PIK3R1	1425514_at 1425515_at 1438682_at 1444591_at 1451737_at	1613	0.946	0.5240	Yes
5	GRB2	1418508_a_at 1449111_a_at	5050	0.386	0.4054	No
6	CD28	1417597_at 1437025_at 1443703_at	5475	0.347	0.4203	No
7	CD86	1420404_at 1449858_at	9864	0.034	0.2235	No
8	ITK	1417171_at 1430833_at 1452518_a_at 1456836_at 1457120_at	9942	0.030	0.2229	No
9	CD3D	1422828_at	11144	-0.046	0.1727	No
10	CD3G	1419178_at	12305	-0.117	0.1313	No
11	CD3E	1422105_at 1445748_at	12436	-0.126	0.1379	No
12	CD247	1420716_at 1426079_at 1426396_at 1428059_at 1428060_at 1438392_at 1452539_a_at	12463	-0.128	0.1493	No
13	CD80	1427717_at 1432826_a_at 1440592_at 1451950_a_at 1454372_at 1457952_at	16176	-0.391	0.0186	No
14	PTPN11	1421196_at 1427699_a_at 1451225_at	18189	-0.608	-0.0131	No
15	ICOSLG	1419212_at 1426087_at	18803	-0.698	0.0279	No
16	ICOS	1421930_at 1421931_at 1436598_at	20816	-1.164	0.0510	No